CDS

Accession Number TCMCG015C50964
gbkey CDS
Protein Id XP_027085135.1
Location join(24941616..24941682,24941790..24942019,24943794..24943940,24944042..24944257,24945741..24945845,24945952..24946056,24946133..24946255,24947257..24947353,24947671..24947707,24947827..24947860,24952398..24952475,24952555..24952620,24956001..24956067,24956161..24956214,24956481..24956588,24957400..24957464,24959355..24959433,24960344..24960561,24960951..24961136)
Gene LOC113707156
GeneID 113707156
Organism Coffea arabica

Protein

Length 693aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027229334.1
Definition mediator of RNA polymerase II transcription subunit 34-like isoform X3 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category L
Description ATP-dependent DNA helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10899        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009378        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016592        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043138        [VIEW IN EMBL-EBI]
GO:0043140        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAGTTCAGAAGAAATCCTACAGGAGCTTCTCAATGTCGAGGTCGAACTTCACGATGTGCAAGAGCAGTTGAAGGAATTGCTAGACCGACAGGATGAGTTATATCAAAGGCAATCTGAACTGAAAGCGTTGTTGGAAAGCTGTGAATCATCATCAAGAAGAAGCCCTGGGAAGATTGACGGATCGTCCGATTGCACTGAGAATTGGTCAGGGACATTTGAATGGGACTCTCAAGCTGATGATATTAGGTTCAATGTTTTCGGAATTCCTACCTATCGTGCAAATCAGCGAGAGATAATAAATGCAGTCATGACTGGAAGAGATGTTCTTGTGATTATGGCGGCTGGCGGAGGCAAGAGTCTTTGTTATCAACTTCCTGCTGTTCTTAAAAATGGGGTTGCTCTGGTTGTCAGCCCTTTGCTTTCTCTTATTCAAGATCAGGTAATGGGCTTGGCTGCTTTGGGCATCCCAGCATTCATGTTGACGTCAACCACCGGTAAGGAAGATGAAAAGTTCATATACAAGGCTCTTGAAAAGGGTGATGGAGAGCTTAAAATACTATATGTTACACCAGAGAAGATATCGAAGAGCAAAAGATTCATGTCAAAACTTGAAAAGTGTCATCATGCTGGTCGGCTGTCTCTAATTTCTATTGATGAAGCACATTGTTGTAGTCAATGGGGCCATGATTTTCGTCCAGACTACAAGAATCTTGGCATCTTAAAGACTCAGTTTCCAGATGTTCCTGTTATTGCTCTGACCGCTACAGCAACAAAAAAAGTGCAAGAAGATCTAATGGAGATGCTACATGTTTCAAAATGTGTTAAGTTTGTCAGCACAGTGAACAGGCCTAATCTTTTTTATACGGTAAGAGAAAAATCATCTGTTGGGAAGGTAGTCATTGATGAAATTGCTGCATATATACAAGCATCTTATCCAAATAATGAGTCTGGCATAGTTTATTGCTTCTCCAGAAAGGAGTGTGAACAGAAATGTAGGTTGCAAAAGAATTGCGTGAGAAGGGAATATCAGCTGACTATTATCATGCTGATATGGATGTACATGCTCGTGAGAAAGTTCATTTACGGTGGAGCAATGGCAAGTTGCAGGTTATTGTTGGAACAGTGGCTTTTGGTATGGGAATCAACAAACCAGATGGAAAGCGGGCGGGCTGGAAGAGATGGCCTTCCTTCAGAATGTGTTCTGTACTTTAGACCTGGTGATGTTCCTAGGCAGAGCTCAATGGTCTTCTATGAGAATGCTGGATTGCAAAATCTCTACGACATAGTGCGATACTGTCTGTCGAAAAGAGAATGCCGCCGAGGTGCTTTTTTCCGACATTTTGCCGAGCCTCTACGAGATTGTAATGGGATGTGTGACAACTGTGCTTTTGCAAGTGATGTGAAGGAATTGGATGTATCTGCTTATGCAAAAATGATAGTATCACTACTGCAAGATTTACAAGAGAATGATCAAAGAGTTACGATGCTGCAACTGGCGGACAAACTGAAGGTTAAGCAGAAAGGAGTAGATCCTGAGCTAAAGAGAGATGAATTGGAGCAACTTGTCATTCAGCTTATACTGGAACGCGTTTTGAAAGAGGAATTCCAGCATACTGCTTATGCTACAAATGCTTATGTCACTATTGGACCCTTGTCAAAGTATGTGTTACATGGGAAAAAAATTATTAAGCTTGAAGTTTCCAGTGGACAGAAAGGTAACTCAAGCATTTTGAAACAATCAAAACGCACTAAATCAGGCGATTTGGAGTTCAAGCTTGACAAGCTACGAAAAGAACTGGCTTCCATTAATGGGGGGATATTCCCCCACTCTGTGTTGTCTACCCAACAAATTAGCATGCTGAGTGTCCAGCAGCCAAAATCAGTTGAACAGTTGGAGAAGGTGATTGGAAAGCTAAAGACACAGAAATATGGTGTCCGGATTCTCGAAGAAATTGAAAATTTTGAATCCAATAACCAATCTAACAACATTTTAGAGAGTCAAATAAGTAGAGCTTCTAAGAAAATGAAATCCACGAAGACACCTGTTATCATAGAGAGTAGTGGAGATGAAGCATGA
Protein:  
MGSSEEILQELLNVEVELHDVQEQLKELLDRQDELYQRQSELKALLESCESSSRRSPGKIDGSSDCTENWSGTFEWDSQADDIRFNVFGIPTYRANQREIINAVMTGRDVLVIMAAGGGKSLCYQLPAVLKNGVALVVSPLLSLIQDQVMGLAALGIPAFMLTSTTGKEDEKFIYKALEKGDGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPVIALTATATKKVQEDLMEMLHVSKCVKFVSTVNRPNLFYTVREKSSVGKVVIDEIAAYIQASYPNNESGIVYCFSRKECEQKCRLQKNCVRREYQLTIIMLIWMYMLVRKFIYGGAMASCRLLLEQWLLVWESTNQMESGRAGRDGLPSECVLYFRPGDVPRQSSMVFYENAGLQNLYDIVRYCLSKRECRRGAFFRHFAEPLRDCNGMCDNCAFASDVKELDVSAYAKMIVSLLQDLQENDQRVTMLQLADKLKVKQKGVDPELKRDELEQLVIQLILERVLKEEFQHTAYATNAYVTIGPLSKYVLHGKKIIKLEVSSGQKGNSSILKQSKRTKSGDLEFKLDKLRKELASINGGIFPHSVLSTQQISMLSVQQPKSVEQLEKVIGKLKTQKYGVRILEEIENFESNNQSNNILESQISRASKKMKSTKTPVIIESSGDEA